PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.G4UQ7
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 101aa    MW: 11820.6 Da    PI: 10.0301
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.G4UQ7genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH469.1e-153076455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                  hn  ErrRRdriN+++  L+el+  +      K +Ka++L +A+eY+ksL+
  Araip.G4UQ7 30 VHNLSERRRRDRINERMRALQELILRC-----NKSDKASMLDEAIEYLKSLK 76
                 6*************************8.....6*****************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.1E-182382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-192486IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.1932675IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.11E-72980No hitNo description
PfamPF000103.3E-123075IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-143281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MRKDVDIEFS EAKKQARGST STKRSRAAEV HNLSERRRRD RINERMRALQ ELILRCNKSD  60
KASMLDEAIE YLKSLKLQVQ VYSFLLSSAF CLTFLLENFC S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13439ERRRRD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016185419.12e-44PREDICTED: transcription factor PIF1-like
SwissprotQ8GZM72e-34PIF1_ARATH; Transcription factor PIF1
TrEMBLA0A0B2SWP83e-42A0A0B2SWP8_GLYSO; Transcription factor PIF1
TrEMBLA0A0S3RYD55e-42A0A0S3RYD5_PHAAN; Uncharacterized protein
STRINGGLYMA02G19000.14e-40(Glycine max)
STRINGGLYMA10G04890.22e-38(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46073351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.38e-27phytochrome interacting factor 3-like 5